2 years ago
#66226
Salted
Unpacking a tuple within a list using spaCy's char_span
I have a dict that looks like this:
TRAIN_DATA = {'here is some text': [('1', '4', 'entity_label')], 'here is more text': [('2', '7', 'entity_label_2')], 'and even more text': [('1', '4', 'entity_label')]}
I'm trying to convert this to the format required for spaCy's NER model, using the following:
import pandas as pd
import spacy
from spacy.tokens import DocBin
nlp = spacy.blank("en") # load a new spacy model
db = DocBin() # create a DocBin object
for text, annot in TRAIN_DATA: # data in previous format
doc = nlp.make_doc(text) # create doc object from text
ents = []
for start, end, label in annot: # add character indexes
span = doc.char_span(start, end, label=label, alignment_mode="contract")
if span is None:
print("Skipping entity")
else:
ents.append(span)
doc.ents = ents # label the text with the ents
db.add(doc)
db.to_disk("train.spacy") # save the docbin object
It yields ValueError: not enough values to unpack (expected 3, got 2)
When I try something slightly different:
nlp = spacy.blank("en") # load a new spacy model
db = DocBin() # create a DocBin object
for body, [(entities)] in TRAIN_DATA.items():
doc = nlp(body)
ents = []
for start, end, label in entities:
span = doc.char_span(int(start), int(end), label=label, alignment_mode='contract')
ents.append(span)
doc.ents = ents
db.add(doc)
db.to_disk("train.spacy")
It yields the same error. When I remove the tuple and list notation (i.e. for body, entities...
vs for body, [(entities)]
) I get expected 2, got 3 instead of expected 3 got 2...
I've tried troubleshooting by unpacking the tuple manually (i.e. for i in entities.split(", ") print (i)
, and that seems to find all the values in the tuple, so I'm not sure what I'm doing wrong.
python-3.x
spacy
iterable-unpacking
spacy-3
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