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Questions - fasta

Why won't my for/if loop work for renaming sequence names in a fasta file in bash

I am currently working on a bioinformatics project, and have been assigned the role of editing some genetic sequence files (fasta/.fa) to be viable for the next stage of processing. I am doing this on...
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Joshcole2504

bash

loops

command-line

fasta

Votes: 0

Answers: 1

Latest Answer

Shell syntax The result I get evertime is 4 lots of 'command not found' as pasted below, per number in the range. [1: command not found [[1: command not found [[1: command not found [[1: command not ...
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John Bollinger

Cannot import name 'TextFace' error while using ETE3 for Phylogeny Tree

I am trying to install ETE3 for phylogeny analysis but while installing it is showing error:cannot import name 'TextFace' I tried all the available options but could not succeed. Any help will be appr...
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shivam

python

bioinformatics

fasta

phylogeny

ete3

Votes: 0

Answers: 0

Could someone explain this code to me - traversing keys in a dictionary?

I have this code that I cobbled together based on some posts on here. It takes a FASTA file (file that features DNA sequences) and finds sequences whose molecular weights are within the given weight r...
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user17660176

python

dictionary

fasta

Votes: 0

Answers: 1

Latest Answer

Python min() returns the smallest item from an iterable object or two or more arguments. Here is the official documentation. i is short for representing the index value within the range from 0 to the ...
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pugi

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